U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CCDC39 coiled-coil domain containing 39 [ Gallus gallus (chicken) ]

    Gene ID: 424969, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    CCDC39provided by CGNC
    Full Name
    coiled-coil domain containing 39provided by CGNC
    Primary source
    CGNC:52302
    See related
    Ensembl:ENSGALG00010018026
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CCDC39 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (16872577..16893332)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (16664636..16685277)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054087 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19 Neighboring gene uncharacterized LOC101749252 Neighboring gene FMR1 autosomal homolog 1 Neighboring gene tetratricopeptide repeat domain 14 Neighboring gene uncharacterized LOC121111476 Neighboring gene peroxisomal biogenesis factor 5 like Neighboring gene ubiquitin specific peptidase 13

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium-dependent cell motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inner dynein arm assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    coiled-coil domain-containing protein 39

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      16872577..16893332
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_422777.8 → XP_422777.5  coiled-coil domain-containing protein 39

      UniProtKB/TrEMBL
      A0A8V0Z490
      Related
      ENSGALP00010025912.1, ENSGALT00010043563.1
      Conserved Domains (1) summary
      COG1196
      Location:66 → 837
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      16664636..16685277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040678828.2 → XP_040534762.1  coiled-coil domain-containing protein 39

      UniProtKB/TrEMBL
      A0A8V0Z490
      Conserved Domains (1) summary
      COG1196
      Location:66 → 843
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.