U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GLB1 galactosidase beta 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 403873, updated on 17-Aug-2024

    Summary

    Official Symbol
    GLB1provided by VGNC
    Official Full Name
    galactosidase beta 1provided by VGNC
    Primary source
    VGNC:VGNC:41249
    See related
    Ensembl:ENSCAFG00845023378
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See GLB1 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (3992209..4074051)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (3776393..3858177)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (3927851..4009519)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (3826915..3908721)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (3954230..4036008)

    Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene sushi domain containing 5 Neighboring gene cartilage associated protein Neighboring gene transmembrane protein with metallophosphoesterase domain Neighboring gene uncharacterized LOC119865339 Neighboring gene uncharacterized LOC111091917 Neighboring gene E3 ubiquitin-protein ligase RNF138-like

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-galactosidase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in vacuole IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    beta-galactosidase
    Names
    acid beta-galactosidase
    lactase
    lysosomal beta-galactosidase
    NP_001032730.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037641.1NP_001032730.1  beta-galactosidase precursor

      See identical proteins and their annotated locations for NP_001032730.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ196436
      UniProtKB/Swiss-Prot
      O62800, Q3HTI1, Q9TRY9
      UniProtKB/TrEMBL
      A0A8C0SB70, A0A8I3PJJ8
      Related
      ENSCAFP00845032404.1, ENSCAFT00845041332.1
      Conserved Domains (2) summary
      pfam01301
      Location:41356
      Glyco_hydro_35; Glycosyl hydrolases family 35
      pfam13364
      Location:527620
      BetaGal_dom4_5; Beta-galactosidase jelly roll domain

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051827.1 Reference ROS_Cfam_1.0

      Range
      3992209..4074051
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049283.1 Alternate UMICH_Zoey_3.1

      Range
      3826915..3908721
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

      Range
      3954230..4036008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

      Range
      3927851..4009519
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      3776393..3858177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)