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    ATP5F1B ATP synthase F1 subunit beta [ Canis lupus familiaris (dog) ]

    Gene ID: 403669, updated on 10-Oct-2024

    Summary

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    Official Symbol
    ATP5F1Bprovided by VGNC
    Official Full Name
    ATP synthase F1 subunit betaprovided by VGNC
    Primary source
    VGNC:VGNC:111356
    See related
    Ensembl:ENSCAFG00845008893
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    ATP5B
    Orthologs
    human mouse all
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    Genomic context

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    See ATP5F1B in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (879724..886261, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (933592..940127, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (1223513..1230049, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (856580..863114, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (1099743..1106277, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif single stranded interacting protein 2 Neighboring gene 60S ribosomal protein L7-like Neighboring gene bromodomain adjacent to zinc finger domain 2A Neighboring gene small nucleolar RNA SNORD59 Neighboring gene small nucleolar RNA SNORD59 Neighboring gene prostaglandin E synthase 3 Neighboring gene nascent polypeptide associated complex subunit alpha Neighboring gene hydroxysteroid 17-beta dehydrogenase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A method for the large-scale cloning of nuclear proteins and nuclear targeting sequences on a functional basis. Pichon B, et al. Anal Biochem, 2000 Sep 10. PMID 10964405
    2. Housekeeping genes for phylogenetic analysis of eutherian relationships. Kullberg M, et al. Mol Biol Evol, 2006 Aug. PMID 16751257
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proton-transporting ATP synthase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton motive force-driven mitochondrial ATP synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP synthase subunit beta, mitochondrial
    Names
    ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
    F1-ATPase beta-subunit
    f1-ATPase beta
    mitochondrial ATP synthase subunit beta subunit
    mitochondrial ATP synthase, H+ transporting F1 complex beta subunit
    XP_038343759.1
    XP_038405650.1
    XP_038469613.1
    XP_038534973.1
    XP_531639.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001419307.1 → NP_001406236.1  ATP synthase subunit beta, mitochondrial

      Status: VALIDATED

      Source sequence(s)
      JAAUVH010000358
      UniProtKB/TrEMBL
      A0A1B1X468, A0A8C0LIM1, A0A8C0N0W7

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      879724..886261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038679045.1 → XP_038534973.1  ATP synthase subunit beta, mitochondrial

      Related
      ENSCAFP00845012158.1, ENSCAFT00845015640.1
      Conserved Domains (1) summary
      PRK09280
      Location:57 → 523
      PRK09280; F0F1 ATP synthase subunit beta; Validated

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      856580..863114 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038487831.1 → XP_038343759.1  ATP synthase subunit beta, mitochondrial

      Conserved Domains (1) summary
      PRK09280
      Location:57 → 523
      PRK09280; F0F1 ATP synthase subunit beta; Validated

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      1099743..1106277 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038613685.1 → XP_038469613.1  ATP synthase subunit beta, mitochondrial

      Conserved Domains (1) summary
      PRK09280
      Location:57 → 523
      PRK09280; F0F1 ATP synthase subunit beta; Validated

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      1223513..1230049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038549722.1 → XP_038405650.1  ATP synthase subunit beta, mitochondrial

      UniProtKB/TrEMBL
      A0A1B1X468, A0A8C0LIM1, A0A8C0N0W7, A0A8I3NCH2, A0A8P0T932
      Conserved Domains (1) summary
      PRK09280
      Location:57 → 523
      PRK09280; F0F1 ATP synthase subunit beta; Validated

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      933592..940127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_531639.7 → XP_531639.2  ATP synthase subunit beta, mitochondrial

      UniProtKB/TrEMBL
      F1PDB4
      Conserved Domains (1) summary
      PRK09280
      Location:57 → 523
      PRK09280; F0F1 ATP synthase subunit beta; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P99504.1 GenPept UniProtKB/Swiss-Prot:P99504

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.