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    GJA1 gap junction protein alpha 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 403418, updated on 17-Aug-2024

    Summary

    Official Symbol
    GJA1provided by VGNC
    Official Full Name
    gap junction protein alpha 1provided by VGNC
    Primary source
    VGNC:VGNC:41231
    See related
    Ensembl:ENSCAFG00845009132
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    cx43
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See GJA1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (61130176..61143784)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (61750272..61753194)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (61515138..61518103)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (61052769..61055708)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (60868101..60871024)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096171 Neighboring gene TBC1 domain family member 32 Neighboring gene uncharacterized LOC102157283 Neighboring gene uncharacterized LOC119870673 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell signaling IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in heart development IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    gap junction alpha-1 protein
    Names
    gap junction protein, alpha 1, 43kDa (connexin 43)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002951.3NP_001002951.2  gap junction alpha-1 protein

      Status: VALIDATED

      Source sequence(s)
      JAAUVH010000354
      UniProtKB/Swiss-Prot
      Q6S9C0
      UniProtKB/TrEMBL
      A0A654IEC4, A0A8C0LBI4, A0A8P0T9K9
      Conserved Domains (2) summary
      pfam00029
      Location:3233
      Connexin
      pfam03508
      Location:293312
      Connexin43; Gap junction alpha-1 protein (Cx43)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      61130176..61143784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038653369.1XP_038509297.1  gap junction alpha-1 protein isoform X1

      UniProtKB/Swiss-Prot
      Q6S9C0
      UniProtKB/TrEMBL
      A0A654IEC4, A0A8C0LBI4, A0A8P0T9K9
      Related
      ENSCAFP00845012583.1, ENSCAFT00845016174.1
      Conserved Domains (2) summary
      pfam00029
      Location:3233
      Connexin
      pfam03508
      Location:293312
      Connexin43; Gap junction alpha-1 protein (Cx43)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      61052769..61055708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      60868101..60871024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      61515138..61518103
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      61750272..61753194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)