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    LHX3 LIM homeobox 3 [ Gallus gallus (chicken) ]

    Gene ID: 373940, updated on 17-Aug-2024

    Summary

    Symbol
    LHX3provided by CGNC
    Full Name
    LIM homeobox 3provided by CGNC
    Primary source
    CGNC:48967
    See related
    Ensembl:ENSGALG00010028203
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    LIM3; lim-3
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See LHX3 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (8652049..8658840)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (8062544..8069323)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene centrosome-associated protein 350-like Neighboring gene quiescin sulfhydryl oxidase 2 Neighboring gene uncharacterized LOC121107033 Neighboring gene chromosome 9 open reading frame 69 Neighboring gene NACC family member 2 Neighboring gene uncharacterized LOC107052223

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General protein information

    Preferred Names
    LIM/homeobox protein Lhx3
    Names
    LIM homeobox protein 3
    homeobox protein LIM-3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030335.2NP_001025506.1  LIM/homeobox protein Lhx3

      See identical proteins and their annotated locations for NP_001025506.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000308
      UniProtKB/Swiss-Prot
      P53412
      Related
      ENSGALP00010042094.1, ENSGALT00010068351.1
      Conserved Domains (3) summary
      cd09376
      Location:87142
      LIM2_Lhx3_Lhx4; The second LIM domain of Lhx3-Lhx4 family
      cd09467
      Location:2579
      LIM1_Lhx3b; The first LIM domain of Lhx3b
      pfam00046
      Location:157210
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8652049..8658840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025156012.3XP_025011780.1  LIM/homeobox protein Lhx3 isoform X1

      Conserved Domains (3) summary
      cd09376
      Location:87142
      LIM2_Lhx3_Lhx4; The second LIM domain of Lhx3-Lhx4 family
      cd09467
      Location:2579
      LIM1_Lhx3b; The first LIM domain of Lhx3b
      pfam00046
      Location:208261
      Homeobox; Homeobox domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8062544..8069323
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046928637.1XP_046784593.1  LIM/homeobox protein Lhx3 isoform X1