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    Miox myo-inositol oxygenase [ Rattus norvegicus (Norway rat) ]

    Gene ID: 252899, updated on 28-Oct-2024

    Summary

    Official Symbol
    Mioxprovided by RGD
    Official Full Name
    myo-inositol oxygenaseprovided by RGD
    Primary source
    RGD:628739
    See related
    EnsemblRapid:ENSRNOG00000008694 AllianceGenome:RGD:628739
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RSOR; Aldrl6
    Summary
    Enables NADP binding activity. Predicted to be involved in inositol catabolic process. Predicted to be located in cytoplasm and inclusion body. Orthologous to human MIOX (myo-inositol oxygenase). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Restricted expression toward (RPKM 5905.9) See more
    Orthologs
    NEW
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    Genomic context

    See Miox in Genome Data Viewer
    Location:
    7q34
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (122284660..122287158)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (120405031..120407529)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (130308707..130311205)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene SET binding factor 1 Neighboring gene uncharacterized LOC102549998 Neighboring gene adrenomedullin 2 Neighboring gene U6 spliceosomal RNA Neighboring gene lipase maturation factor 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables NADP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables aldo-keto reductase (NADPH) activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables aldo-keto reductase (NADPH) activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables aldo-keto reductase (NADPH) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ferric iron binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ferric iron binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ferric iron binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables inositol oxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables inositol oxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables inositol oxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables inositol oxygenase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on NAD(P)H IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on NAD(P)H ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in inositol catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in inositol catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in inositol catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in inositol catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in inclusion body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in inclusion body ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    inositol oxygenase
    Names
    MI oxygenase
    aldehyde reductase (aldose reductase) like 6
    aldehyde reductase-like 6
    kidney-specific protein 32
    renal-specific oxido-reductase
    renal-specific oxidoreductase
    NP_665714.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145771.2NP_665714.2  inositol oxygenase

      See identical proteins and their annotated locations for NP_665714.2

      Status: PROVISIONAL

      Source sequence(s)
      BC078840
      UniProtKB/Swiss-Prot
      Q5S8C8, Q68G06, Q99PN7, Q9QXN4
      UniProtKB/TrEMBL
      A0A0H2UHH0, A6K7L4
      Related
      ENSRNOP00000011941.5, ENSRNOT00000011941.7
      Conserved Domains (1) summary
      pfam05153
      Location:37285
      MIOX; Myo-inositol oxygenase

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      122284660..122287158
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)