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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001253702.1 → NP_001240631.1 suppressor of tumorigenicity 7 protein-like isoform 2
See identical proteins and their annotated locations for NP_001240631.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC166156, AI834981, AK030273, BC058781
- Consensus CDS
-
CCDS57250.1
- UniProtKB/Swiss-Prot
-
Q8K4P7
- UniProtKB/TrEMBL
-
Q8CDC5
- Related
- ENSMUSP00000102380.2, ENSMUST00000106769.8
- Conserved Domains (1) summary
-
- cd11557
Location:75 → 510
- ST7; Suppression of tumorigenicity 7
-
NM_001253703.1 → NP_001240632.1 suppressor of tumorigenicity 7 protein-like isoform 3
See identical proteins and their annotated locations for NP_001240632.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame internal segment compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC166156, AI834981, AK030273, AK144075
- Consensus CDS
-
CCDS79994.1
- UniProtKB/Swiss-Prot
-
Q8K4P7
- UniProtKB/TrEMBL
-
Q8CDC5
- Related
- ENSMUSP00000143759.2, ENSMUST00000200132.5
- Conserved Domains (1) summary
-
- cd11557
Location:75 → 464
- ST7; Suppression of tumorigenicity 7
-
NM_153091.3 → NP_694731.1 suppressor of tumorigenicity 7 protein-like isoform 1
See identical proteins and their annotated locations for NP_694731.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC166156, AI834981, AK030273, BC058781
- Consensus CDS
-
CCDS17705.1
- UniProtKB/Swiss-Prot
- Q3T9Y2, Q3UNR1, Q8K4P7
- Related
- ENSMUSP00000058455.7, ENSMUST00000059271.13
- Conserved Domains (1) summary
-
- cd11557
Location:75 → 542
- ST7; Suppression of tumorigenicity 7
RNA
-
NR_045578.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice junction at the 3' end of an exon compared to variant 1, that causes a frameshift. This transcript is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC166156, AI834981, AK030273, AK148099, BC058781
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
104771822..104837384
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030252589.2 → XP_030108449.1 suppressor of tumorigenicity 7 protein-like isoform X1
- Conserved Domains (1) summary
-
- cd11557
Location:1 → 330
- ST7; Suppression of tumorigenicity 7