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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001039056.2 → NP_001034145.1 ATP-sensitive inward rectifier potassium channel 15 isoform b
See identical proteins and their annotated locations for NP_001034145.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region and uses a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 5, 7, 9 and 11 encode the same isoform (b).
- Source sequence(s)
-
AC154691, AK165436
- Consensus CDS
-
CCDS37410.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Related
- ENSMUSP00000109485.2, ENSMUST00000113854.8
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001039057.2 → NP_001034146.1 ATP-sensitive inward rectifier potassium channel 15 isoform a
See identical proteins and their annotated locations for NP_001034146.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform a. Variants 1, 4, 6, 8, and 10 encode the same isoform (a).
- Source sequence(s)
-
AC154691, AI116801, AK165436
- Consensus CDS
-
CCDS28351.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Related
- ENSMUSP00000045218.8, ENSMUST00000037154.14
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271687.1 → NP_001258616.1 ATP-sensitive inward rectifier potassium channel 15 isoform a
See identical proteins and their annotated locations for NP_001258616.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 4, 6, 8, and 10 encode the same isoform (a).
- Source sequence(s)
-
AC154691, AI891955, AK165436
- Consensus CDS
-
CCDS28351.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271689.1 → NP_001258618.1 ATP-sensitive inward rectifier potassium channel 15 isoform b
See identical proteins and their annotated locations for NP_001258618.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and 5' coding region and uses a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 5, 7, 9 and 11 encode the same isoform (b).
- Source sequence(s)
-
AC154546, AC154691
- Consensus CDS
-
CCDS37410.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Related
- ENSMUSP00000109486.2, ENSMUST00000113855.8
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271690.1 → NP_001258619.1 ATP-sensitive inward rectifier potassium channel 15 isoform a
See identical proteins and their annotated locations for NP_001258619.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. Variants 1, 4, 6, 8, and 10 encode the same isoform (a).
- Source sequence(s)
-
AC154691, AK165346, AK165436
- Consensus CDS
-
CCDS28351.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Related
- ENSMUSP00000109492.2, ENSMUST00000113861.8
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271691.1 → NP_001258620.1 ATP-sensitive inward rectifier potassium channel 15 isoform b
See identical proteins and their annotated locations for NP_001258620.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR and 5' coding region and uses a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 5, 7, 9 and 11 encode the same isoform (b).
- Source sequence(s)
-
AC154691, AK165436, AW012236
- Consensus CDS
-
CCDS37410.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271692.1 → NP_001258621.1 ATP-sensitive inward rectifier potassium channel 15 isoform a
See identical proteins and their annotated locations for NP_001258621.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Variants 1, 4, 6, 8, and 10 encode the same isoform (a).
- Source sequence(s)
-
AC154546, AC154691
- Consensus CDS
-
CCDS28351.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271693.1 → NP_001258622.1 ATP-sensitive inward rectifier potassium channel 15 isoform b
See identical proteins and their annotated locations for NP_001258622.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR and 5' coding region and uses a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 5, 7, 9 and 11 encode the same isoform (b).
- Source sequence(s)
-
AC154691, AK165436, AW258994, AY377988
- Consensus CDS
-
CCDS37410.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271694.1 → NP_001258623.1 ATP-sensitive inward rectifier potassium channel 15 isoform a
See identical proteins and their annotated locations for NP_001258623.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR compared to variant 1. Variants 1, 4, 6, 8, and 10 encode the same isoform (a).
- Source sequence(s)
-
AC154691, AK165436, AW319416
- Consensus CDS
-
CCDS28351.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_001271695.1 → NP_001258624.1 ATP-sensitive inward rectifier potassium channel 15 isoform b
See identical proteins and their annotated locations for NP_001258624.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (11) differs in the 5' UTR and 5' coding region and uses a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 5, 7, 9 and 11 encode the same isoform (b).
- Source sequence(s)
-
AC154691, AI891955, AK165436, BB843850
- Consensus CDS
-
CCDS37410.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
NM_019664.5 → NP_062638.1 ATP-sensitive inward rectifier potassium channel 15 isoform b
See identical proteins and their annotated locations for NP_062638.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and 5' coding region and uses a downstream start codon, compared to variant 1. The encoded isoform (b) has a shorter N-terminus, compared to isoform a. Variants 2, 3, 5, 7, 9 and 11 encode the same isoform (b).
- Source sequence(s)
-
AC154691, AK165436, AW260030, AY377988
- Consensus CDS
-
CCDS37410.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Related
- ENSMUSP00000109487.2, ENSMUST00000113856.8
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
RNA
-
NR_073406.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) uses an alternate splice site and two alternate internal exons, compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC154546, AC154691
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
95058417..95101119
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006522944.3 → XP_006523007.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
See identical proteins and their annotated locations for XP_006523007.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Related
- ENSMUSP00000109493.2, ENSMUST00000113862.8
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522951.4 → XP_006523014.1 ATP-sensitive inward rectifier potassium channel 15 isoform X3
See identical proteins and their annotated locations for XP_006523014.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522942.4 → XP_006523005.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
See identical proteins and their annotated locations for XP_006523005.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522950.4 → XP_006523013.1 ATP-sensitive inward rectifier potassium channel 15 isoform X2
See identical proteins and their annotated locations for XP_006523013.1
- UniProtKB/TrEMBL
-
Q3TR79
- Conserved Domains (2) summary
-
- pfam01007
Location:46 → 187
- IRK; Inward rectifier potassium channel
- pfam17655
Location:194 → 365
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522945.4 → XP_006523008.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
See identical proteins and their annotated locations for XP_006523008.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_017316883.2 → XP_017172372.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Related
- ENSMUSP00000109490.2, ENSMUST00000113859.8
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_017316885.1 → XP_017172374.1 ATP-sensitive inward rectifier potassium channel 15 isoform X3
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Related
- ENSMUSP00000109489.3, ENSMUST00000113858.3
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_036159796.1 → XP_036015689.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_017316884.1 → XP_017172373.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522947.3 → XP_006523010.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
See identical proteins and their annotated locations for XP_006523010.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522946.4 → XP_006523009.1 ATP-sensitive inward rectifier potassium channel 15 isoform X1
See identical proteins and their annotated locations for XP_006523009.1
- UniProtKB/TrEMBL
- B7ZNJ9, Q3TNE6, Q3TR79, Q3UQ02
- Conserved Domains (2) summary
-
- pfam01007
Location:57 → 198
- IRK; Inward rectifier potassium channel
- pfam17655
Location:205 → 376
- IRK_C; Inward rectifier potassium channel C-terminal domain
-
XM_006522952.5 → XP_006523015.1 ATP-sensitive inward rectifier potassium channel 15 isoform X3
See identical proteins and their annotated locations for XP_006523015.1
- UniProtKB/Swiss-Prot
- O88932, Q9JK34
- UniProtKB/TrEMBL
- Q3TR79, Q53Z04
- Conserved Domains (2) summary
-
- pfam01007
Location:30 → 171
- IRK; Inward rectifier potassium channel
- pfam17655
Location:178 → 349
- IRK_C; Inward rectifier potassium channel C-terminal domain