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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001301628.2 → NP_001288557.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 2
See identical proteins and their annotated locations for NP_001288557.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon compared to variant 1. It encodes isoform 2 which is shorter than isoform 1.
- Source sequence(s)
-
AC153021, AC158802
- Consensus CDS
-
CCDS88095.1
- UniProtKB/Swiss-Prot
-
Q8R5H1
- Related
- ENSMUSP00000020334.9, ENSMUST00000020334.9
- Conserved Domains (6) summary
-
- smart00695
Location:24 → 121
- DUSP; Domain in ubiquitin-specific proteases
- COG5560
Location:12 → 903
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
- cd02674
Location:755 → 902
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:261 → 446
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam14533
Location:462 → 568
- USP7_C2; Ubiquitin-specific protease C-terminal
- pfam14836
Location:135 → 222
- Ubiquitin_3; Ubiquitin-like domain
-
NM_001428484.1 → NP_001415413.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC153021, AC158802
-
NM_001428485.1 → NP_001415414.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC153021, AC158802
-
NM_001428486.1 → NP_001415415.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AC153021, AC158802
-
NM_001428487.1 → NP_001415416.1 ubiquitin carboxyl-terminal hydrolase 15 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC153021, AC158802
-
NM_027604.5 → NP_081880.2 ubiquitin carboxyl-terminal hydrolase 15 isoform 1
See identical proteins and their annotated locations for NP_081880.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC153021, AC158802
- Consensus CDS
-
CCDS24217.1
- UniProtKB/Swiss-Prot
- Q3TGF5, Q3TTB2, Q3UL25, Q3UZH0, Q80TY6, Q80UK9, Q8R5H1
- Related
- ENSMUSP00000151244.2, ENSMUST00000220377.2
- Conserved Domains (6) summary
-
- smart00695
Location:24 → 121
- DUSP; Domain in ubiquitin-specific proteases
- COG5560
Location:12 → 932
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
- cd02674
Location:784 → 931
- Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:290 → 475
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam14533
Location:491 → 597
- USP7_C2; Ubiquitin-specific protease C-terminal
- pfam14836
Location:135 → 222
- Ubiquitin_3; Ubiquitin-like domain
RNA
-
NR_190377.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC153021, AC158802
-
NR_190378.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC153021, AC158802
-
NR_190379.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC158802
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000076.7 Reference GRCm39 C57BL/6J
- Range
-
122940911..123032924 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036155616.1 → XP_036011509.1 ubiquitin carboxyl-terminal hydrolase 15 isoform X3
- Conserved Domains (1) summary
-
- COG5560
Location:34 → 683
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
-
XM_036155615.1 → XP_036011508.1 ubiquitin carboxyl-terminal hydrolase 15 isoform X1
- Conserved Domains (1) summary
-
- COG5560
Location:63 → 712
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
-
XM_006513227.5 → XP_006513290.1 ubiquitin carboxyl-terminal hydrolase 15 isoform X5
- Conserved Domains (1) summary
-
- COG5560
Location:1 → 633
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
-
XM_006513226.5 → XP_006513289.1 ubiquitin carboxyl-terminal hydrolase 15 isoform X4
- Conserved Domains (1) summary
-
- COG5560
Location:32 → 681
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
-
XM_006513225.5 → XP_006513288.1 ubiquitin carboxyl-terminal hydrolase 15 isoform X2
- Conserved Domains (1) summary
-
- COG5560
Location:41 → 690
- UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
-
XM_006513228.5 → XP_006513291.1 ubiquitin carboxyl-terminal hydrolase 15 isoform X6
- UniProtKB/TrEMBL
-
Q3TPH3
- Conserved Domains (2) summary
-
- smart00695
Location:24 → 121
- DUSP; Domain in ubiquitin-specific proteases
- pfam14836
Location:135 → 222
- Ubiquitin_3; Ubiquitin-like domain
RNA
-
XR_004936099.1 RNA Sequence
-
XR_380365.5 RNA Sequence