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    Fbp1 fructose bisphosphatase 1 [ Mus musculus (house mouse) ]

    Gene ID: 14121, updated on 2-Nov-2024

    Summary

    Official Symbol
    Fbp1provided by MGI
    Official Full Name
    fructose bisphosphatase 1provided by MGI
    Primary source
    MGI:MGI:95492
    See related
    Ensembl:ENSMUSG00000069805 AllianceGenome:MGI:95492
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fbp2; Fbp3; Fbp-2
    Summary
    Enables fructose 1,6-bisphosphate 1-phosphatase activity. Involved in gluconeogenesis. Predicted to be located in extracellular space and nucleus. Predicted to be active in cytosol. Is expressed in several structures, including alimentary system; cerebral cortex; facial bone primordium; ganglia; and genitourinary system. Human ortholog(s) of this gene implicated in fructose-1,6-bisphosphatase deficiency. Orthologous to human FBP1 (fructose-bisphosphatase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in liver adult (RPKM 540.1), kidney adult (RPKM 489.1) and 3 other tissues See more
    Orthologs
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    Genomic context

    See Fbp1 in Genome Data Viewer
    Location:
    13 B3; 13 32.74 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (63012567..63036112, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (62864753..62888298, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34784 Neighboring gene malic enzyme 1, NADP(+)-dependent, cytosolic pseudogene Neighboring gene STARR-seq mESC enhancer starr_34785 Neighboring gene fructose bisphosphatase 2 Neighboring gene STARR-seq mESC enhancer starr_34786 Neighboring gene predicted gene, 38679 Neighboring gene predicted gene, 40981 Neighboring gene STARR-positive B cell enhancer ABC_E7247 Neighboring gene tubulin, beta 2a, pseudogene 1 Neighboring gene aminopeptidase O

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (1) 
    • Endonuclease-mediated (3) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables AMP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables AMP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables RNA polymerase II-specific DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA polymerase II-specific DNA-binding transcription factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables fructose 1,6-bisphosphate 1-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables fructose 1,6-bisphosphate 1-phosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables fructose 1,6-bisphosphate 1-phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables fructose 1,6-bisphosphate 1-phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables metal ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables monosaccharide binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables monosaccharide binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in cellular hyperosmotic salinity response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular hypotonic salinity response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to cAMP IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to insulin stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to magnesium ion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to magnesium ion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cellular response to phorbol 13-acetate 12-myristate IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to raffinose IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to xenobiotic stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to xenobiotic stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in dephosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in dephosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in fructose 1,6-bisphosphate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fructose 6-phosphate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in fructose 6-phosphate metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in fructose 6-phosphate metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in fructose metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in gluconeogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in gluconeogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in gluconeogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in gluconeogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in gluconeogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of Ras protein signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of Ras protein signal transduction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of cell growth ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of cell growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of glycolytic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of glycolytic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of gluconeogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of gluconeogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in response to nutrient levels IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    fructose-1,6-bisphosphatase 1
    Names
    D-fructose-1,6-bisphosphate 1-phosphohydrolase 1
    D-fructose-1,6-bisphosphate 1-phosphohydrolase 3
    FBPase liver
    fructose-1,6-bisphosphatase isozyme 3
    liver FBPase
    NP_062268.1
    XP_011242790.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001429028.1NP_001415957.1  fructose-1,6-bisphosphatase 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC156572, AC171004
    2. NM_001429029.1NP_001415958.1  fructose-1,6-bisphosphatase 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC156572, AC171004
    3. NM_001429030.1NP_001415959.1  fructose-1,6-bisphosphatase 1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC156572, AC171004
    4. NM_019395.4NP_062268.1  fructose-1,6-bisphosphatase 1 isoform 1

      See identical proteins and their annotated locations for NP_062268.1

      Status: VALIDATED

      Source sequence(s)
      AC156572, AC171004
      Consensus CDS
      CCDS26590.1
      UniProtKB/Swiss-Prot
      P97323, Q3UEH1, Q9QXD6
      Related
      ENSMUSP00000090564.5, ENSMUST00000092888.11
      Conserved Domains (1) summary
      cd00354
      Location:18332
      FBPase; Fructose-1,6-bisphosphatase, an enzyme that catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway. The alignment model also includes chloroplastic FBPases and sedoheptulose-1, ...

    RNA

    1. NR_190570.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC156572, AC171004

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      63012567..63036112 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244488.2XP_011242790.1  fructose-1,6-bisphosphatase 1 isoform X1

      Conserved Domains (1) summary
      cd00354
      Location:1248
      FBPase; Fructose-1,6-bisphosphatase, an enzyme that catalyzes the hydrolysis of fructose-1,6-biphosphate into fructose-6-phosphate and is critical in gluconeogenesis pathway. The alignment model also includes chloroplastic FBPases and sedoheptulose-1, ...