U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Orai1 ORAI calcium release-activated calcium modulator 1 [ Mus musculus (house mouse) ]

    Gene ID: 109305, updated on 2-Nov-2024

    Summary

    Official Symbol
    Orai1provided by MGI
    Official Full Name
    ORAI calcium release-activated calcium modulator 1provided by MGI
    Primary source
    MGI:MGI:1925542
    See related
    Ensembl:ENSMUSG00000049686 AllianceGenome:MGI:1925542
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    orai-1; Tmem142a; D730049H07Rik
    Summary
    Enables store-operated calcium channel activity. Involved in G protein-coupled receptor signaling pathway; ligand-gated ion channel signaling pathway; and positive regulation of insulin secretion. Acts upstream of or within calcium ion import; mammary gland epithelium development; and store-operated calcium entry. Located in basolateral plasma membrane. Is active in plasma membrane. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and skin. Human ortholog(s) of this gene implicated in immunodeficiency 9 and tubular aggregate myopathy 2. Orthologous to human ORAI1 (ORAI calcium release-activated calcium modulator 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in duodenum adult (RPKM 54.2), lung adult (RPKM 35.6) and 26 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Orai1 in Genome Data Viewer
    Location:
    5 F; 5 62.72 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (123153078..123168515)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (123015074..123030452)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA A930024E05 gene Neighboring gene STARR-seq mESC enhancer starr_14304 Neighboring gene predicted gene 2479 Neighboring gene STARR-positive B cell enhancer ABC_E3616 Neighboring gene STARR-positive B cell enhancer mm9_chr5:123489053-123489354 Neighboring gene MORN repeat containing 3 Neighboring gene predicted gene, 42023 Neighboring gene STARR-seq mESC enhancer starr_14309 Neighboring gene STARR-positive B cell enhancer ABC_E6376 Neighboring gene predicted gene 6444

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables calcium channel activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables store-operated calcium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables store-operated calcium channel activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables store-operated calcium channel activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables store-operated calcium channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in adaptive immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in calcineurin-NFAT signaling cascade ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within calcium ion import IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in calcium ion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within calcium-ion regulated exocytosis ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    acts_upstream_of_or_within establishment of localization in cell ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in ion channel modulating, G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ion channel modulating, G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in ligand-gated ion channel signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in ligand-gated ion channel signaling pathway ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    acts_upstream_of_or_within mammary gland epithelium development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of adenylate cyclase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of adenylate cyclase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of calcium ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of calcium ion transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of insulin secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of insulin secretion ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in regulation of calcium ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in store-operated calcium entry IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within store-operated calcium entry IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in store-operated calcium entry ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in store-operated calcium entry ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in basolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell periphery ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in growth cone ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane raft ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane raft ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in plasma membrane raft ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane raft ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    calcium release-activated calcium channel protein 1
    Names
    calcium release-activated calcium channel 1
    protein orai-1
    transmembrane protein 142A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175423.3NP_780632.1  calcium release-activated calcium channel protein 1

      See identical proteins and their annotated locations for NP_780632.1

      Status: VALIDATED

      Source sequence(s)
      AK052573, AK085755, BQ553253
      Consensus CDS
      CCDS39261.1
      UniProtKB/Swiss-Prot
      Q8BUD4, Q8BWG9, Q8R586
      UniProtKB/TrEMBL
      A3KCG1
      Related
      ENSMUSP00000113097.2, ENSMUST00000121652.8
      Conserved Domains (1) summary
      pfam07856
      Location:75270
      Orai-1; Mediator of CRAC channel activity

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      123153078..123168515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530116.4XP_006530179.1  calcium release-activated calcium channel protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006530179.1

      Conserved Domains (1) summary
      pfam07856
      Location:1165
      Orai-1; Mediator of CRAC channel activity
    2. XM_006530117.4XP_006530180.1  calcium release-activated calcium channel protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006530180.1

      Conserved Domains (1) summary
      pfam07856
      Location:1165
      Orai-1; Mediator of CRAC channel activity