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    TRAP1 TNF receptor associated protein 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 102153194, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAP1provided by VGNC
    Official Full Name
    TNF receptor associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:47776
    See related
    Ensembl:ENSCAFG00845001854
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TRAP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (37760017..37811929)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (38873867..38925736)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (37847123..37898963)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (37543278..37595139)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (37436377..37488256)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872337 Neighboring gene CREB binding protein Neighboring gene uncharacterized LOC119881518 Neighboring gene deoxyribonuclease 1 Neighboring gene uncharacterized LOC111096317 Neighboring gene SLX4 structure-specific endonuclease subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heat shock protein 75 kDa, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      37760017..37811929
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038669352.1 → XP_038525280.1  heat shock protein 75 kDa, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0LIV0, A0A8C0M2U1, A0A8C0ST65, A0A8I3RRV1
      Related
      ENSCAFP00845002684.1, ENSCAFT00845003380.1
      Conserved Domains (1) summary
      PRK05218
      Location:85 → 700
      PRK05218; heat shock protein 90; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      37543278..37595139
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038479322.1 → XP_038335250.1  heat shock protein 75 kDa, mitochondrial

      Conserved Domains (1) summary
      PRK05218
      Location:85 → 700
      PRK05218; heat shock protein 90; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      37436377..37488256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038604670.1 → XP_038460598.1  heat shock protein 75 kDa, mitochondrial

      Conserved Domains (1) summary
      PRK05218
      Location:85 → 700
      PRK05218; heat shock protein 90; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      37847123..37898963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038540571.1 → XP_038396499.1  heat shock protein 75 kDa, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0LIV0, A0A8C0M2U1, A0A8C0ST65, A0A8I3RRV1
      Conserved Domains (1) summary
      PRK05218
      Location:85 → 700
      PRK05218; heat shock protein 90; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      38873867..38925736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038548600.1 → XP_038404528.1  heat shock protein 75 kDa, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0LIV0, A0A8C0M2U1, A0A8C0ST65, A0A8I3RRV1
      Conserved Domains (1) summary
      PRK05218
      Location:85 → 700
      PRK05218; heat shock protein 90; Provisional
    Nucleotide Protein
    Heading Accession and Version

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