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    TAGLN transgelin [ Pan troglodytes (chimpanzee) ]

    Gene ID: 100615570, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TAGLNprovided by VGNC
    Official Full Name
    transgelinprovided by VGNC
    Primary source
    VGNC:VGNC:11650
    Locus tag
    CK820_G0015768
    See related
    Ensembl:ENSPTRG00000004320
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See TAGLN in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (119141664..119147111)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (118360729..118368832)

    Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene platelet activating factor acetylhydrolase 1b catalytic subunit 2 Neighboring gene SID1 transmembrane family member 2 Neighboring gene proprotein convertase subtilisin/kexin type 7 Neighboring gene ring finger protein 214 Neighboring gene small Cajal body-specific RNA 11 Neighboring gene beta-secretase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transgelin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      119141664..119147111
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003313318.6 → XP_003313366.1  transgelin

      See identical proteins and their annotated locations for XP_003313366.1

      UniProtKB/TrEMBL
      A0A2I3SQC8, A0A2J8N308, A0A6D2XLR0, H2Q4U6
      Related
      ENSPTRP00000007410.4
      Conserved Domains (2) summary
      pfam00402
      Location:175 → 199
      Calponin; Calponin family repeat
      cd21279
      Location:23 → 143
      CH_TAGLN; calponin homology (CH) domain found in transgelin
    Nucleotide Protein
    Heading Accession and Version

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