U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    prag1 PEAK1 related, kinase-activating pseudokinase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486686, updated on 4-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    prag1provided by Xenbase
    Official Full Name
    PEAK1 related, kinase-activating pseudokinase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-5933625
    See related
    Ensembl:ENSXETG00000017090 AllianceGenome:Xenbase:XB-GENE-5933625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    sgk223; pragmin
    Summary
    Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human PRAG1 (PEAK1 related, kinase-activating pseudokinase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See prag1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (83629705..83657939)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (89902845..89931089)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene centromere protein C Neighboring gene EPH receptor A5 Neighboring gene membrane bound O-acyltransferase domain containing 4 Neighboring gene COP9 signalosome subunit 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    inactive tyrosine-protein kinase PRAG1
    Names
    homolog of rat pragma of Rnd2
    tyrosine-protein kinase SgK223

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      83629705..83657939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002936454.5 → XP_002936500.1  inactive tyrosine-protein kinase PRAG1

      UniProtKB/TrEMBL
      F7EH58
      Related
      ENSXETP00000037256.4, ENSXETT00000037256.5
      Conserved Domains (1) summary
      cl21453
      Location:1061 → 1218
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.