rnf115 ring finger protein 115 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: rnf115provided by Xenbase
Official Full Name: ring finger protein 115provided by Xenbase
Primary source: Xenbase:XB-GENE-993231
See related: Ensembl:ENSXETG00000018682
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	8	NC_030684.2 (141761006..141780147, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	8	NC_030684.1 (116914830..116938687)

Chromosome 8 - NC_030684.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info
enables ubiquitin protein ligase activity	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: E3 ubiquitin-protein ligase RNF115

NP_001135621.1

EC 2.3.2.27

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001142149.1 → NP_001135621.1 E3 ubiquitin-protein ligase RNF115

See identical proteins and their annotated locations for NP_001135621.1

Status: PROVISIONAL

Source sequence(s)

BC168458

UniProtKB/TrEMBL

B5DDY5, F6YPF5

Related

ENSXETP00000040440.5, ENSXETT00000040440.5

Conserved Domains (2) summary

cd16800
Location:219 → 265

RING-H2_RNF115; RING finger, H2 subclass, found in RING finger protein 115 (RNF115) and similar proteins

pfam14369
Location:11 → 40

zinc_ribbon_9; zinc-ribbon