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    coq6 coenzyme Q6 monooxygenase [ Cyprinodon variegatus (sheepshead minnow) ]

    Gene ID: 107092376, updated on 14-Mar-2024

    Summary

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    Gene symbol
    coq6
    Gene description
    coenzyme Q6 monooxygenase
    See related
    Ensembl:ENSCVAG00000022926
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinodon variegatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
    Orthologs
    human zebrafish all
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    Genomic context

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    See coq6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150832.1 (68852..83272)

    NW_015150832.1Genomic Context describing neighboring genes Neighboring gene neuroglobin Neighboring gene FAM161 centrosomal protein B Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5a Neighboring gene basal body orientation factor 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015150832.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 2-octaprenyl-6-methoxyphenol hydroxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquinone biosynthesis monooxygenase COQ6, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C_variegatus-1.0 Primary Assembly

    Genomic

    1. NW_015150832.1 Reference C_variegatus-1.0 Primary Assembly

      Range
      68852..83272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015386827.1 → XP_015242313.1  ubiquinone biosynthesis monooxygenase COQ6, mitochondrial

      UniProtKB/TrEMBL
      A0A3Q2EKU4
      Related
      ENSCVAP00000032684.1, ENSCVAT00000028734.1
      Conserved Domains (2) summary
      TIGR01988
      Location:50 → 481
      Ubi-OHases; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
      cl21454
      Location:49 → 477
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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