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    CtBP C-terminal binding protein [ Drosophila virilis ]

    Gene ID: 6632368, updated on 23-May-2024

    Summary

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    Gene symbol
    CtBP
    Gene description
    C-terminal binding protein
    Locus tag
    Dvir_GJ10351
    See related
    EnsemblRapid:LOC6632368
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila virilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    CtBP-PA; CtBP-PB; CtBP-PC; CtBP-PD; CtBP-PE; CtBP-PF; CtBP-PG; GJ10351; Dvir\CtBP; GJ10351-PA; GJ10351-PB; GJ10351-PC; GJ10351-PD; GJ10351-PE; GJ10351-PF; GJ10351-PG
    Orthologs
    fruit fly all
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    Genomic context

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    See CtBP in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587552.1 (2816488..2829905, complement)

    NW_022587552.1Genomic Context describing neighboring genes Neighboring gene lethal (3) 87Df Neighboring gene traB domain-containing protein Neighboring gene uncharacterized LOC26531470 Neighboring gene protein MEMO1 Neighboring gene uncharacterized LOC6632370 Neighboring gene uncharacterized LOC6632371

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022587552 Unplaced Scaffold Reference DvirRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Developmental expression and phylogenetic conservation of alternatively spliced forms of the C-terminal binding protein corepressor. Mani-Telang P, et al. Dev Genes Evol, 2007 Feb. PMID 17120023, Free PMC Article
    2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein
    Names
    Dvir\CtBP-PA
    Dvir\CtBP-PB
    Dvir\CtBP-PC
    Dvir\CtBP-PD
    Dvir\CtBP-PE
    Dvir\CtBP-PF
    Dvir\CtBP-PG
    Dvir\GJ10351
    Dvir\GJ10351-PA
    Dvir\GJ10351-PB
    Dvir\GJ10351-PC
    Dvir\GJ10351-PD
    Dvir\GJ10351-PE
    Dvir\GJ10351-PF
    Dvir\GJ10351-PG
    dvir_GLEANR_10280

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DvirRS2

    Genomic

    1. NW_022587552.1 Reference DvirRS2

      Range
      2816488..2829905 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032433644.1 → XP_032289535.1  C-terminal-binding protein isoform X1

      Related
      XP_032289535.1, XM_032433644.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_032433643.1 → XP_032289534.1  C-terminal-binding protein isoform X1

      Related
      XP_032289534.1, XM_032433643.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    3. XM_015170388.2 → XP_015025874.1  C-terminal-binding protein isoform X6

      UniProtKB/TrEMBL
      A0A0Q9WDP1
      Related
      XP_015025874.1, XM_015170388.2
      Conserved Domains (2) summary
      COG1052
      Location:45 → 351
      LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    4. XM_015170386.2 → XP_015025872.1  C-terminal-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A0Q9W103
      Related
      XP_015025872.1, XM_015170386.2
      Conserved Domains (2) summary
      COG1052
      Location:45 → 351
      LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    5. XM_015170387.2 → XP_015025873.1  C-terminal-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A0Q9W1T3
      Related
      XP_015025873.1, XM_015170387.2
      Conserved Domains (2) summary
      COG1052
      Location:45 → 351
      LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    6. XM_032433648.1 → XP_032289539.1  C-terminal-binding protein isoform X7

      Related
      XP_032289539.1, XM_032433648.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    7. XM_002056162.3 → XP_002056198.1  C-terminal-binding protein isoform X5

      See identical proteins and their annotated locations for XP_002056198.1

      UniProtKB/TrEMBL
      B4M3U9
      Related
      XP_002056198.1, XM_002056162.3
      Conserved Domains (2) summary
      COG1052
      Location:45 → 354
      LdhA; Lactate dehydrogenase or related 2-hydroxyacid dehydrogenase [Energy production and conversion, Coenzyme transport and metabolism, General function prediction only]
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    8. XM_032433647.1 → XP_032289538.1  C-terminal-binding protein isoform X3

      Related
      XP_032289538.1, XM_032433647.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    9. XM_032433642.1 → XP_032289533.1  C-terminal-binding protein isoform X1

      Related
      XP_032289533.1, XM_032433642.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    10. XM_015170390.2 → XP_015025876.1  C-terminal-binding protein isoform X8

      UniProtKB/TrEMBL
      A0A0Q9W9A3
      Related
      XP_015025876.1, XM_015170390.2
      Conserved Domains (1) summary
      cd05299
      Location:28 → 342
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    11. XM_032433645.1 → XP_032289536.1  C-terminal-binding protein isoform X1

      Related
      XP_032289536.1, XM_032433645.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    12. XM_032433646.1 → XP_032289537.1  C-terminal-binding protein isoform X1

      Related
      XP_032289537.1, XM_032433646.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 345
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein Strain
    Heading Accession and Version

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