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    LOC6547894 protein tumorous imaginal discs, mitochondrial [ Drosophila erecta ]

    Gene ID: 6547894, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6547894
    Gene description
    protein tumorous imaginal discs, mitochondrial
    Locus tag
    Dere_GG22881
    See related
    EnsemblRapid:LOC6547894
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila erecta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GG22881; GG22881-PA; GG22881-PB; GG22881-PC; GG22881-PD
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6547894 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (1713488..1715584, complement)

    NW_020825207.1Genomic Context describing neighboring genes Neighboring gene Egl_like_exo domain-containing protein Neighboring gene sestrin homolog Neighboring gene purine nucleoside phosphorylase 1 Neighboring gene Alg3, alpha-1,3- mannosyltransferase Neighboring gene WD40 domain-containing protein denticleless Neighboring gene Tumor necrosis factor alpha-induced protein 8-like protein sigmar

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825207 Unplaced Scaffold Reference DereRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heat shock protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrion organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to heat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein tumorous imaginal discs, mitochondrial
    Names
    Dere\GG22881
    Dere\GG22881-PA
    Dere\GG22881-PB
    Dere\GG22881-PC
    Dere\GG22881-PD
    dere_GLEANR_7570

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DereRS2

    Genomic

    1. NW_020825207.1 Reference DereRS2

      Range
      1713488..1715584 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001976417.3 → XP_001976453.1  protein tumorous imaginal discs, mitochondrial isoform X3

      See identical proteins and their annotated locations for XP_001976453.1

      UniProtKB/TrEMBL
      B3NPR2
      Related
      XP_001976453.1, XM_001976417.3
      Conserved Domains (4) summary
      cd10747
      Location:288 → 409
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
      COG0484
      Location:63 → 437
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:65 → 127
      DnaJ; DnaJ domain
      pfam00684
      Location:227 → 287
      DnaJ_CXXCXGXG; DnaJ central domain

    2. XM_015157171.2 → XP_015012657.1  protein tumorous imaginal discs, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A0Q5W2Z7
      Related
      XP_015012657.1, XM_015157171.2
      Conserved Domains (4) summary
      cd10719
      Location:227 → 287
      DnaJ_zf; Zinc finger domain of DnaJ and HSP40
      cd10747
      Location:288 → 409
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
      COG0484
      Location:63 → 437
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:65 → 127
      DnaJ; DnaJ domain

    3. XM_015157170.2 → XP_015012656.1  protein tumorous imaginal discs, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A0Q5W094
      Related
      XP_015012656.1, XM_015157170.2
      Conserved Domains (4) summary
      cd10719
      Location:227 → 287
      DnaJ_zf; Zinc finger domain of DnaJ and HSP40
      cd10747
      Location:288 → 409
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
      COG0484
      Location:63 → 437
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:65 → 127
      DnaJ; DnaJ domain

    4. XM_015157169.2 → XP_015012655.1  protein tumorous imaginal discs, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A0Q5VNK0
      Related
      XP_015012655.1, XM_015157169.2
      Conserved Domains (4) summary
      cd10719
      Location:227 → 287
      DnaJ_zf; Zinc finger domain of DnaJ and HSP40
      cd10747
      Location:288 → 409
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
      COG0484
      Location:63 → 437
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:65 → 127
      DnaJ; DnaJ domain
    Nucleotide Protein
    Heading Accession and Version

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