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    U13 U13 [ Human betaherpesvirus 6A ]

    Gene ID: 1487895, updated on 18-Aug-2023

    Summary

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    Gene symbol
    U13
    Gene description
    U13
    Locus tag
    HHV6_p05
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Human betaherpesvirus 6A (isolate: U1102, nat-host: Homo sapiens)
    Lineage
    Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus
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    Genomic context

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    Sequence:
    NC_001664.4 (22947..23267)

    NC_001664.4Genomic Context describing neighboring genes Neighboring gene U10 Neighboring gene pp100 Neighboring gene GCR Neighboring gene U14 Neighboring gene U15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001664.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human herpesvirus-6 glycoprotein H and L homologs are components of the gp100 complex and the gH external domain is the target for neutralizing monoclonal antibodies. Liu DX, et al. Virology, 1993 Nov. PMID 7692666
    2. Identification and characterization of a human herpesvirus 6 gene segment that trans activates the human immunodeficiency virus type 1 promoter. Geng YQ, et al. J Virol, 1992 Mar. PMID 1310766, Free PMC Article
    3. The right end of the unique region of the genome of human herpesvirus 6 U1102 contains a candidate immediate early gene enhancer and a homologue of the human cytomegalovirus US22 gene family. Thomson BJ, et al. J Gen Virol, 1992 Jul. PMID 1321205
    4. Identification of homologues to the human cytomegalovirus US22 gene family in human herpesvirus 6. Efstathiou S, et al. J Gen Virol, 1992 Jul. PMID 1321206
    5. Infectivity determinants encoded in a conserved gene block of human herpesvirus-6. Gompels UA, et al. DNA Seq, 1992. PMID 1333836

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    U13
    NP_042905.1
    • EFRF1; positional counterpart of HHV-5 UL34, but much smaller

    VOG classification

    Description:

    • VOGd0469 [U] Uncharacterized (removed 9632209)
    • Unknown Proteins

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001664.4 Reference assembly

      Range
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_042905.1 U13 [Human betaherpesvirus 6A]

      See identical proteins and their annotated locations for NP_042905.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q69036, Q69548
      UniProtKB/TrEMBL
      M9TFZ6
    Nucleotide Protein
    Heading Accession and Version

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