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    LOC106953590 elongation of very long chain fatty acids protein 4-like [ Poecilia latipinna (sailfin molly) ]

    Gene ID: 106953590, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC106953590
    Gene description
    elongation of very long chain fatty acids protein 4-like
    See related
    Ensembl:ENSPLAG00000000210
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Poecilia latipinna
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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    Genomic context

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    See LOC106953590 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113206.1 (299589..309344)

    NW_015113206.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 38 Neighboring gene F-box protein 32 Neighboring gene PRELI domain containing 3A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015113206.1 Unplaced Scaffold Reference P_latipinna-1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation, monounsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, polyunsaturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid elongation, saturated fatty acid IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation of very long chain fatty acids protein 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P_latipinna-1.0

    Genomic

    1. NW_015113206.1 Reference P_latipinna-1.0

      Range
      299589..309344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015042471.1 → XP_014897957.1  elongation of very long chain fatty acids protein 4-like

      UniProtKB/TrEMBL
      A0A3B3VG30
      Related
      ENSPLAP00000023769.1, ENSPLAT00000005094.1
      Conserved Domains (1) summary
      pfam01151
      Location:30 → 261
      ELO; GNS1/SUR4 family

    2. XM_015042469.1 → XP_014897955.1  elongation of very long chain fatty acids protein 4-like

      UniProtKB/TrEMBL
      A0A3B3VG30
      Conserved Domains (1) summary
      pfam01151
      Location:30 → 261
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version

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