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    LOC129373003 cytochrome c oxidase subunit 6A, mitochondrial [ Poeciliopsis prolifica (blackstripe livebearer) ]

    Gene ID: 129373003, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC129373003
    Gene description
    cytochrome c oxidase subunit 6A, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Poeciliopsis prolifica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poeciliopsis
    Also known as
    COX6A
    Orthologs
    zebrafish all
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    Genomic context

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    See LOC129373003 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_04 current Auburn_PproV2 (GCF_027474105.1) Unplaced Scaffold NW_026562406.1 (3502292..3504646)

    NW_026562406.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2, group IB (pancreas) Neighboring gene asialoglycoprotein receptor-like 1 Neighboring gene uncharacterized LOC129373002 Neighboring gene HPS4 biogenesis of lysosomal organelles complex 3 subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026562406 Unplaced Scaffold Reference Auburn_PproV2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome c oxidase subunit 6A, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027474105.1-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Auburn_PproV2

    Genomic

    1. NW_026562406.1 Reference Auburn_PproV2

      Range
      3502292..3504646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055050673.1 → XP_054906648.1  cytochrome c oxidase subunit 6A, mitochondrial

    Nucleotide Protein
    Heading Accession and Version

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