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    AMACR alpha-methylacyl-CoA racemase [ Equus asinus (ass) ]

    Gene ID: 106824737, updated on 13-Mar-2024

    Summary

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    Gene symbol
    AMACR
    Gene description
    alpha-methylacyl-CoA racemase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus asinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See AMACR in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current ASM1607732v2 (GCF_016077325.2) 10 NC_052186.1 (63436944..63453020)
    100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638591.1 (8720721..8736819)

    Chromosome 10 - NC_052186.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123289620 Neighboring gene C1q and TNF related 3 Neighboring gene solute carrier family 45 member 2 Neighboring gene relaxin family peptide receptor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-methylacyl-CoA racemase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-methylacyl-CoA racemase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1607732v2

    Genomic

    1. NC_052186.1 Reference ASM1607732v2

      Range
      63436944..63453020
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014831212.2 → XP_014686698.1  alpha-methylacyl-CoA racemase isoform X1

      UniProtKB/TrEMBL
      A0A8C4PQ85
      Conserved Domains (1) summary
      COG1804
      Location:3 → 373
      CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]

    2. XM_044779436.1 → XP_044635371.1  alpha-methylacyl-CoA racemase isoform X2

      Conserved Domains (1) summary
      COG1804
      Location:28 → 319
      CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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