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    LOC100795715 protein SOSEKI 2 [ Glycine max (soybean) ]

    Gene ID: 100795715, updated on 30-Mar-2023

    Summary

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    Gene symbol
    LOC100795715
    Gene description
    protein SOSEKI 2
    Locus tag
    GLYMA_13G322200v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100795715 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (41021237..41027348, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (41652880..41658005, complement)

    Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100795370 Neighboring gene basic helix-loop-helix transcription factor Neighboring gene arp2/3 complex-activating protein rickA Neighboring gene probable glucuronoxylan glucuronosyltransferase IRX7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein SOSEKI 2
    Names
    protein UPSTREAM OF FLC

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      41021237..41027348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006594902.4 → XP_006594965.1  protein SOSEKI 2 isoform X1

      See identical proteins and their annotated locations for XP_006594965.1

      Conserved Domains (1) summary
      pfam06136
      Location:32 → 417
      DUF966; Domain of unknown function (DUF966)

    2. XM_041008493.1 → XP_040864427.1  protein SOSEKI 2 isoform X2

      UniProtKB/TrEMBL
      I1M4G6
      Conserved Domains (1) summary
      pfam06136
      Location:32 → 419
      DUF966; Domain of unknown function (DUF966)

    3. XM_006594901.4 → XP_006594964.1  protein SOSEKI 2 isoform X1

      See identical proteins and their annotated locations for XP_006594964.1

      Conserved Domains (1) summary
      pfam06136
      Location:32 → 417
      DUF966; Domain of unknown function (DUF966)

    4. XM_014766047.3 → XP_014621533.1  protein SOSEKI 2 isoform X1

      Conserved Domains (1) summary
      pfam06136
      Location:32 → 417
      DUF966; Domain of unknown function (DUF966)

    5. XM_006594900.4 → XP_006594963.1  protein SOSEKI 2 isoform X1

      See identical proteins and their annotated locations for XP_006594963.1

      Conserved Domains (1) summary
      pfam06136
      Location:32 → 417
      DUF966; Domain of unknown function (DUF966)

    6. XM_003543398.5 → XP_003543446.2  protein SOSEKI 2 isoform X3

      Conserved Domains (1) summary
      pfam06136
      Location:32 → 419
      DUF966; Domain of unknown function (DUF966)
    Nucleotide Protein
    Heading Accession and Version

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