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    LOC100811384 probable methyltransferase PMT20 [ Glycine max (soybean) ]

    Gene ID: 100811384, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100811384
    Gene description
    probable methyltransferase PMT20
    Locus tag
    GLYMA_09G213100v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100811384 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 9 NC_038245.2 (44551710..44556918, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 9 NC_038245.1 (43683236..43688530, complement)

    Chromosome 9 - NC_038245.2Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase F-4 Neighboring gene uncharacterized LOC102669120 Neighboring gene uncharacterized LOC100811917 Neighboring gene uncharacterized LOC100812465

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable methyltransferase PMT20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038245.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      44551710..44556918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003534265.4 → XP_003534313.1  probable methyltransferase PMT20

      See identical proteins and their annotated locations for XP_003534313.1

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80 → 586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase

    2. XM_014762318.3 → XP_014617804.1  probable methyltransferase PMT20

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80 → 586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase

    3. XM_006587571.4 → XP_006587634.1  probable methyltransferase PMT20

      See identical proteins and their annotated locations for XP_006587634.1

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80 → 586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase

    4. XM_041005097.1 → XP_040861031.1  probable methyltransferase PMT20

      UniProtKB/TrEMBL
      I1J832, I1L555
      Conserved Domains (1) summary
      pfam03141
      Location:80 → 586
      Methyltransf_29; Putative S-adenosyl-L-methionine-dependent methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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