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    PGR progesterone receptor [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102360139, updated on 19-Jun-2024

    Summary

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    Gene symbol
    PGR
    Gene description
    progesterone receptor
    See related
    Ensembl:ENSLACG00000013150
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Orthologs
    zebrafish all
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    Genomic context

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    See PGR in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 4 NC_088142.1 (209173841..209436007)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005819507.1 (735070..1005822, complement)

    Chromosome 4 - NC_088142.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element-derived protein 4-like Neighboring gene 5S ribosomal RNA Neighboring gene Rho GTPase activating protein 42a Neighboring gene uncharacterized LOC135356399 Neighboring gene contactin 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables estrogen response element binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear steroid receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear receptor-mediated steroid hormone signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    progesterone receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088142.1 Reference fLatCha1.pri

      Range
      209173841..209436007
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014490243.1 → XP_014345729.1  progesterone receptor

      UniProtKB/TrEMBL
      M3XH03
      Related
      ENSLACP00000022009.1, ENSLACT00000025487.1
    Nucleotide Protein
    Heading Accession and Version

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