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    LOC11407604 sulfite exporter TauE/SafE family protein 3 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11407604, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC11407604
    Gene description
    sulfite exporter TauE/SafE family protein 3
    Locus tag
    MtrunA17_Chr8g0373471
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC11407604 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 8 NC_053049.1 (35593470..35597722, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 8 NC_016414.2 (33123121..33127416, complement)

    Chromosome 8 - NC_053049.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112417088 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene U1 small nuclear ribonucleoprotein 70 kDa Neighboring gene proline-rich receptor-like protein kinase PERK4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual RNA-Seq analysis of Medicago truncatula and the pea powdery mildew Erysiphe pisi uncovers distinct host transcriptional signatures during incompatible and compatible interactions and pathogen effector candidates. Gupta M, et al. Genomics, 2020 May. PMID 31837401
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul4A-RING E3 ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sulfite exporter TauE/SafE family protein 3
    Names
    putative transmembrane protein TauE

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053049.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      35593470..35597722 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003629420.4 → XP_003629468.2  sulfite exporter TauE/SafE family protein 3

      UniProtKB/TrEMBL
      A0A0C3Y3V1, G7LEU1, I3S415
      Conserved Domains (1) summary
      pfam01925
      Location:355 → 436
      TauE; Sulfite exporter TauE/SafE
    Nucleotide Protein
    Heading Accession and Version

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