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    Rab23 RAB23, member RAS oncogene family [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100731259, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Rab23
    Gene description
    RAB23, member RAS oncogene family
    See related
    Ensembl:ENSCPOG00000030218
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Rab23 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947493.1 (3040398..3065244, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176419.1 (85710245..85735153)

    NW_026947493.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 451 Neighboring gene BAG cochaperone 2 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene uncharacterized LOC106025745 Neighboring gene uncharacterized LOC134477813

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947493.1 Reference mCavPor4.1

      Range
      3040398..3065244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013143807.3 → XP_012999261.1  ras-related protein Rab-23 isoform X1

      See identical proteins and their annotated locations for XP_012999261.1

      Conserved Domains (2) summary
      cd04106
      Location:10 → 160
      Rab23_like; Rab GTPase family 23 (Rab23)-like
      pfam00071
      Location:11 → 160
      Ras; Ras family

    2. XM_063256920.1 → XP_063112990.1  ras-related protein Rab-23 isoform X2

      UniProtKB/TrEMBL
      A0A286XJB2

    3. XM_013143805.3 → XP_012999259.1  ras-related protein Rab-23 isoform X1

      See identical proteins and their annotated locations for XP_012999259.1

      Conserved Domains (2) summary
      cd04106
      Location:10 → 160
      Rab23_like; Rab GTPase family 23 (Rab23)-like
      pfam00071
      Location:11 → 160
      Ras; Ras family

    4. XM_013143808.3 → XP_012999262.1  ras-related protein Rab-23 isoform X1

      See identical proteins and their annotated locations for XP_012999262.1

      Conserved Domains (2) summary
      cd04106
      Location:10 → 160
      Rab23_like; Rab GTPase family 23 (Rab23)-like
      pfam00071
      Location:11 → 160
      Ras; Ras family

    5. XM_013143806.3 → XP_012999260.1  ras-related protein Rab-23 isoform X1

      See identical proteins and their annotated locations for XP_012999260.1

      Conserved Domains (2) summary
      cd04106
      Location:10 → 160
      Rab23_like; Rab GTPase family 23 (Rab23)-like
      pfam00071
      Location:11 → 160
      Ras; Ras family
    Nucleotide Protein
    Heading Accession and Version

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