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    LOC105804157 zinc-finger homeodomain protein 2 [ Gossypium raimondii (Peruvian cotton) ]

    Gene ID: 105804157, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC105804157
    Gene description
    zinc-finger homeodomain protein 2
    Locus tag
    B456_007G233800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gossypium raimondii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (33419796..33421353)
    100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (30055388..30057325, complement)

    Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC105801558

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of developmental process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc-finger homeodomain protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2569854v1 Primary Assembly

    Genomic

    1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

      Range
      33419796..33421353
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012636650.2 → XP_012492104.1  zinc-finger homeodomain protein 2

      See identical proteins and their annotated locations for XP_012492104.1

      UniProtKB/TrEMBL
      A0A0D2SIQ6, A0A0D2TK51
      Conserved Domains (2) summary
      TIGR01565
      Location:176 → 232
      homeo_ZF_HD; homeobox domain, ZF-HD class
      pfam04770
      Location:53 → 105
      ZF-HD_dimer; ZF-HD protein dimerization region
    Nucleotide Protein
    Heading Accession and Version

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