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    tmem120b.L transmembrane protein 120B L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 734324, updated on 4-Nov-2024

    Summary

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    Official Symbol
    tmem120b.L
    Official Full Name
    transmembrane protein 120B L homeolog
    Primary source
    Xenbase:XB-GENE-6087423
    Locus tag
    XELAEV_18007823mg
    See related
    EnsemblRapid:ENSXLAG00005036350 AllianceGenome:Xenbase:XB-GENE-6087423
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    tmem120b; tmem120b-a
    Summary
    Predicted to act upstream of or within fat cell differentiation. Predicted to be located in nuclear inner membrane. Orthologous to human TMEM120B (transmembrane protein 120B). [provided by Alliance of Genome Resources, Nov 2024]
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See tmem120b.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (176050508..176066894, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (162896999..162913386, complement)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121395099 Neighboring gene ras homolog family member F (in filopodia) L homeolog Neighboring gene MORN repeat containing 3 L homeolog Neighboring gene ORAI calcium release-activated calcium modulator 2 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC84869

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    NOT enables monoatomic ion channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within fat cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nuclear inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 120B-A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095807.1 → NP_001089276.1  transmembrane protein 120B-A

      See identical proteins and their annotated locations for NP_001089276.1

      Status: PROVISIONAL

      Source sequence(s)
      BC090205
      UniProtKB/Swiss-Prot
      Q5EAX9
      UniProtKB/TrEMBL
      A0A974I5S0
      Related
      ENSXLAP00005108755.1, ENSXLAT00005110919.1
      Conserved Domains (1) summary
      pfam07851
      Location:7 → 330
      TMPIT; TMPIT-like protein

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      176050508..176066894 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5EAX9.1 GenPept UniProtKB/Swiss-Prot:Q5EAX9

    Gene LinkOut

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