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    LOC105637551 phospholipase D Z [ Jatropha curcas ]

    Gene ID: 105637551, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC105637551
    Gene description
    phospholipase D Z
    Locus tag
    JCGZ_07083
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Jatropha curcas
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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    Genomic context

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    See LOC105637551 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590956.1 (1629256..1632648)
    101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124394.1 (588249..591655)

    NW_023590956.1Genomic Context describing neighboring genes Neighboring gene transmembrane 9 superfamily member 8 Neighboring gene BTB/POZ domain-containing protein NPY1 Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial Neighboring gene probable WRKY transcription factor 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phospholipase D Z

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RJC1_Hi-C Primary Assembly

    Genomic

    1. NW_023590956.1 Reference RJC1_Hi-C Primary Assembly

      Range
      1629256..1632648
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012221036.3 → XP_012076426.1  phospholipase D Z

      UniProtKB/TrEMBL
      A0A067KBJ9
      Conserved Domains (2) summary
      cd09106
      Location:36 → 203
      PLDc_vPLD3_4_5_like_1; Putative catalytic domain, repeat 1, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins
      cd09107
      Location:301 → 497
      PLDc_vPLD3_4_5_like_2; Putative catalytic domain, repeat 2, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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