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    LYPD3 LY6/PLAUR domain containing 3 [ Colobus angolensis palliatus ]

    Gene ID: 105526950, updated on 13-Mar-2024

    Summary

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    Gene symbol
    LYPD3
    Gene description
    LY6/PLAUR domain containing 3
    See related
    Ensembl:ENSCANG00000019216
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Colobus angolensis palliatus (sub-species: palliatus)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
    Orthologs
    human mouse all
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    Genomic context

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    See LYPD3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012119599.1 (4320052..4324973)

    NW_012119599.1Genomic Context describing neighboring genes Neighboring gene ETHE1 persulfide dioxygenase Neighboring gene pleckstrin homology like domain family B member 3 Neighboring gene testis expressed 101 Neighboring gene CD177 molecule

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012119599.1 Unplaced Scaffold Reference Cang.pa_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ly6/PLAUR domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cang.pa_1.0

    Genomic

    1. NW_012119599.1 Reference Cang.pa_1.0

      Range
      4320052..4324973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011963128.1 → XP_011818518.1  ly6/PLAUR domain-containing protein 3

      UniProtKB/TrEMBL
      A0A2K5HMW4
      Related
      ENSCANP00000005666.1, ENSCANT00000021600.1
      Conserved Domains (2) summary
      cd00117
      Location:32 → 117
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...
      pfam00021
      Location:141 → 223
      UPAR_LY6; u-PAR/Ly-6 domain
    Nucleotide Protein
    Heading Accession and Version

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