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    AMD14_RS22305 class I SAM-dependent rRNA methyltransferase [ Xanthomonas citri pv. citri ]

    Gene ID: 66913335, updated on 1-Aug-2024

    Summary

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    Gene symbol
    AMD14_RS22305
    Gene description
    class I SAM-dependent rRNA methyltransferase
    Locus tag
    AMD14_RS22305
    Gene type
    protein coding
    Organism
    Xanthomonas citri pv. citri (strain: MN12, pathovar: citri, nat-host: citrus spp., sub-species: citri)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
    Old locus tag
    J164_04498; J164_RS22355
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    Genomic context

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    NZ_CP008998.1Genomic Context describing neighboring genes Neighboring gene dipeptidase Neighboring gene hypothetical protein Neighboring gene TerC family protein Neighboring gene rhomboid family intramembrane serine protease

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP008998.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative Genomics of Xanthomonas citri pv. citri A* Pathotype Reveals Three Distinct Clades with Varying Plasmid Distribution. Webster J, et al. Microorganisms, 2020 Dec 8. PMID 33302542, Free PMC Article
    2. Many paths to methyltransfer: a chronicle of convergence. Schubert HL, et al. Trends Biochem Sci, 2003 Jun. PMID 12826405, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    class I SAM-dependent rRNA methyltransferase
    WP_003482248.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP008998.1 Reference assembly

      Range
      5109444..5110610 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003482248.1 MULTISPECIES: class I SAM-dependent rRNA methyltransferase [Xanthomonas]

      See identical proteins and their annotated locations for WP_003482248.1

      UniProtKB/TrEMBL
      A0A0U5F7K2, A0A7S6YX59, A0A9X6BDD6, A0AAI8EUD8, M4U047
      Conserved Domains (1) summary
      COG1092
      Location:9 → 388
      RlmK; 23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version