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    LOC101218361 4-coumarate--CoA ligase 2 [ Cucumis sativus (cucumber) ]

    Gene ID: 101218361, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101218361
    Gene description
    4-coumarate--CoA ligase 2
    Locus tag
    Csa_016278
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101218361 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 7 NC_026661.2 (20015822..20017814, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 7 NC_026661.1 (16795703..16797609, complement)

    Chromosome 7 - NC_026661.2Genomic Context describing neighboring genes Neighboring gene myosin-12 Neighboring gene 4-coumarate--CoA ligase 2 Neighboring gene 4-coumarate--CoA ligase 2 Neighboring gene uncharacterized LOC105436187 Neighboring gene tyrosine-sulfated glycopeptide receptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables CoA-ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    4-coumarate--CoA ligase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026661.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      20015822..20017814 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004135846.3 → XP_004135894.2  4-coumarate--CoA ligase 2

      See identical proteins and their annotated locations for XP_004135894.2

      UniProtKB/TrEMBL
      A0A0A0K658, A0A0A0K8H9
      Conserved Domains (1) summary
      PLN02246
      Location:4 → 539
      PLN02246; 4-coumarate--CoA ligase
    Nucleotide Protein
    Heading Accession and Version

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