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    LOC101220772 CO(2)-response secreted protease [ Cucumis sativus (cucumber) ]

    Gene ID: 101220772, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101220772
    Gene description
    CO(2)-response secreted protease
    Locus tag
    Csa_004324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101220772 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 6 NC_026660.2 (19835336..19840619, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 6 NC_026660.1 (17891002..17896190, complement)

    Chromosome 6 - NC_026660.2Genomic Context describing neighboring genes Neighboring gene putative RING-H2 finger protein ATL69 Neighboring gene uncharacterized CRM domain-containing protein At3g25440, chloroplastic Neighboring gene thioredoxin-like protein CITRX, chloroplastic Neighboring gene protein spotted leaf 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CO(2)-response secreted protease

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026660.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      19835336..19840619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011659161.2 → XP_011657463.1  CO(2)-response secreted protease

      See identical proteins and their annotated locations for XP_011657463.1

      UniProtKB/TrEMBL
      A0A0A0KJ05
      Conserved Domains (5) summary
      cd04852
      Location:122 → 608
      Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3
      COG1404
      Location:514 → 666
      AprE; Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones]
      cd02120
      Location:372 → 503
      PA_subtilisin_like; Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, ...
      pfam05922
      Location:43 → 122
      Inhibitor_I9; Peptidase inhibitor I9
      pfam17766
      Location:689 → 786
      fn3_6; Fibronectin type-III domain
    Nucleotide Protein
    Heading Accession and Version

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