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    LOC101218879 uncharacterized LOC101218879 [ Cucumis sativus (cucumber) ]

    Gene ID: 101218879, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101218879
    Gene description
    uncharacterized LOC101218879
    Locus tag
    Csa_017821
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101218879 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 5 NC_026659.2 (14046654..14054259, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 5 NC_026659.1 (3018594..3025769, complement)

    Chromosome 5 - NC_026659.2Genomic Context describing neighboring genes Neighboring gene phytosulfokine receptor 1-like Neighboring gene uncharacterized LOC101213463 Neighboring gene BTB/POZ domain-containing protein At3g19850 Neighboring gene uncharacterized LOC116403689

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC101218879

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026659.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      14046654..14054259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004149445.3 → XP_004149493.2  uncharacterized protein LOC101218879

      See identical proteins and their annotated locations for XP_004149493.2

      UniProtKB/TrEMBL
      A0A0A0KPW6
      Conserved Domains (3) summary
      cd04371
      Location:340 → 418
      DEP; DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is ...
      pfam04784
      Location:501 → 623
      DUF547; Protein of unknown function, DUF547
      cl00388
      Location:230 → 302
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein
    Heading Accession and Version

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