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    LOC101207128 uncharacterized ATP-dependent helicase C29A10.10c [ Cucumis sativus (cucumber) ]

    Gene ID: 101207128, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101207128
    Gene description
    uncharacterized ATP-dependent helicase C29A10.10c
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101207128 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 4 NC_026658.2 (18087287..18096292)
    101 previous assembly ASM407v2 (GCF_000004075.2) 4 NC_026658.1 (15197923..15206898)

    Chromosome 4 - NC_026658.2Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum-Golgi intermediate compartment protein 3 Neighboring gene ethylene-responsive transcription factor RAP2-13 Neighboring gene uncharacterized WD repeat-containing protein C2A9.03 Neighboring gene uncharacterized LOC116403468 Neighboring gene phosphatidylinositol transfer protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized ATP-dependent helicase C29A10.10c

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026658.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      18087287..18096292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011655524.2 → XP_011653826.1  uncharacterized ATP-dependent helicase C29A10.10c

      UniProtKB/TrEMBL
      A0A0A0L3B2
      Conserved Domains (2) summary
      cd18042
      Location:681 → 1063
      DEXXQc_SETX; DEXXQ-box helicase domain of SETX
      pfam13087
      Location:1040 → 1237
      AAA_12; AAA domain

    RNA

    1. XR_969289.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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