U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC101214812 auxin-responsive protein SAUR78 [ Cucumis sativus (cucumber) ]

    Gene ID: 101214812, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101214812
    Gene description
    auxin-responsive protein SAUR78
    Locus tag
    Csa_001247
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101214812 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (26707423..26708399, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (25445461..25445943, complement)

    Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene dormancy-associated protein homolog 4 Neighboring gene 40S ribosomal protein SA Neighboring gene GDSL esterase/lipase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to auxin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    auxin-responsive protein SAUR78

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      26707423..26708399 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011653418.2 → XP_011651720.1  auxin-responsive protein SAUR78

      See identical proteins and their annotated locations for XP_011651720.1

      UniProtKB/TrEMBL
      A0A0A0LBZ7
      Conserved Domains (1) summary
      pfam02519
      Location:9 → 106
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases