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    LOC101214821 plasmodesmata-located protein 2 [ Cucumis sativus (cucumber) ]

    Gene ID: 101214821, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101214821
    Gene description
    plasmodesmata-located protein 2
    Locus tag
    Csa_006121
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101214821 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (9973857..9976053, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (9678119..9679857, complement)

    Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101215059 Neighboring gene mitochondrial import receptor subunit TOM9-2 Neighboring gene oxidation resistance protein 1 Neighboring gene zinc finger-like protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in plasmodesmata-mediated intercellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transport of virus in multicellular host IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasmodesma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plasmodesmata-located protein 2
    Names
    cysteine-rich repeat secretory protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      9973857..9976053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011650826.2 → XP_011649128.1  plasmodesmata-located protein 2

      See identical proteins and their annotated locations for XP_011649128.1

      UniProtKB/TrEMBL
      A0A0A0LLG0
      Conserved Domains (1) summary
      pfam01657
      Location:44 → 134
      Stress-antifung; Salt stress response/antifungal
    Nucleotide Protein
    Heading Accession and Version

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