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    LOC101212549 uncharacterized LOC101212549 [ Cucumis sativus (cucumber) ]

    Gene ID: 101212549, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC101212549
    Gene description
    uncharacterized LOC101212549
    Locus tag
    Csa_019182
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC101212549 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (1647518..1652848, complement)
    101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (1508144..1513442, complement)

    Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene two-component response regulator ORR24 Neighboring gene class V chitinase Neighboring gene adenylate kinase 5, chloroplastic Neighboring gene uncharacterized LOC105434545

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC101212549

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      1647518..1652848 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011650416.2 → XP_011648718.1  uncharacterized protein LOC101212549 isoform X2

      Conserved Domains (2) summary
      cd07397
      Location:39 → 266
      MPP_NostocDevT-like; Nostoc DevT and similar proteins, metallophosphatase domain
      pfam00149
      Location:39 → 238
      Metallophos; Calcineurin-like phosphoesterase

    2. XM_004139228.3 → XP_004139276.1  uncharacterized protein LOC101212549 isoform X1

      See identical proteins and their annotated locations for XP_004139276.1

      UniProtKB/TrEMBL
      A0A0A0LFC0
      Conserved Domains (1) summary
      cd07397
      Location:39 → 277
      MPP_NostocDevT-like; Nostoc DevT and similar proteins, metallophosphatase domain

    3. XM_031881379.1 → XP_031737239.1  uncharacterized protein LOC101212549 isoform X3

      Conserved Domains (1) summary
      cl13995
      Location:39 → 240
      MPP_superfamily; metallophosphatase superfamily, metallophosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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