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    LOC18436716 ammonium transporter 3 member 1 [ Amborella trichopoda ]

    Gene ID: 18436716, updated on 19-Jun-2024

    Summary

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    Gene symbol
    LOC18436716
    Gene description
    ammonium transporter 3 member 1
    Locus tag
    AMTR_s00017p00138130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amborella trichopoda
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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    Genomic context

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    See LOC18436716 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006499159.1 (1954037..1958648)

    NW_006499159.1Genomic Context describing neighboring genes Neighboring gene DNA repair protein XRCC2 homolog Neighboring gene fructose-bisphosphate aldolase 1, chloroplastic Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 Neighboring gene ion channel DMI1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006499159.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ammonium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ammonium transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ammonium transporter 3 member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AMTR1.0 Primary Assembly

    Genomic

    1. NW_006499159.1 Reference AMTR1.0 Primary Assembly

      Range
      1954037..1958648
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011626032.2 → XP_011624334.1  ammonium transporter 3 member 1

      Conserved Domains (1) summary
      cl03012
      Location:26 → 452
      Ammonium_transp; Ammonium Transporter Family
    Nucleotide Protein
    Heading Accession and Version

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