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    LOC105331190 serine/threonine-protein kinase 38-like [ Magallana gigas (Pacific oyster) ]

    Gene ID: 105331190, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC105331190
    Gene description
    serine/threonine-protein kinase 38-like
    Locus tag
    CGI_10007711
    See related
    EnsemblRapid:ENSBDJG00000020556
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Magallana gigas
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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    Genomic context

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    See LOC105331190 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 5 NC_088857.1 (34777358..34798725)
    102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 1 NC_047559.1 (33446095..33467549)

    Chromosome 5 - NC_088857.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor ROR-alpha A Neighboring gene nuclear receptor ROR-gamma Neighboring gene transcription initiation factor TFIID subunit 11 Neighboring gene sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3 Neighboring gene uncharacterized LOC105331193

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-serine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase 38-like
    Names
    Serine/threonine-protein kinase 38-like protein
    serine/threonine protein kinase 38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference xbMagGiga1.1

    Genomic

    1. NC_088857.1 Reference xbMagGiga1.1

      Range
      34777358..34798725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011433283.4 → XP_011431585.1  serine/threonine-protein kinase 38-like isoform X4

      See identical proteins and their annotated locations for XP_011431585.1

      UniProtKB/TrEMBL
      A0A8W8NGL3
      Related
      ENSBDJP00000026014.1, ENSBDJT00000029862.1
      Conserved Domains (1) summary
      cd05599
      Location:86 → 453
      STKc_NDR_like; Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

    2. XM_034451717.2 → XP_034307608.1  serine/threonine-protein kinase 38-like isoform X4

      UniProtKB/TrEMBL
      A0A8W8NGL3
      Conserved Domains (1) summary
      cd05599
      Location:86 → 453
      STKc_NDR_like; Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

    3. XM_011433282.4 → XP_011431584.1  serine/threonine-protein kinase 38-like isoform X3

      UniProtKB/TrEMBL
      A0A8W8NGL3
      Related
      ENSBDJP00000025999.1, ENSBDJT00000029846.1
      Conserved Domains (2) summary
      smart00220
      Location:98 → 391
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd05599
      Location:96 → 463
      STKc_NDR_like; Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

    4. XM_011433281.4 → XP_011431583.3  serine/threonine-protein kinase 38-like isoform X1

    5. XM_066084749.1 → XP_065940821.1  serine/threonine-protein kinase 38-like isoform X2

    Nucleotide Protein
    Heading Accession and Version

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