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    LOC105286123 O-glucosyltransferase rumi homolog [ Ooceraea biroi (clonal raider ant) ]

    Gene ID: 105286123, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC105286123
    Gene description
    O-glucosyltransferase rumi homolog
    Locus tag
    DMN91_011441
    See related
    EnsemblRapid:LOC105286123
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ooceraea biroi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
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    Genomic context

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    See LOC105286123 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Obir_v5.4 (GCF_003672135.1) 12 NC_039517.1 (187791..189692)

    Chromosome 12 - NC_039517.1Genomic Context describing neighboring genes Neighboring gene U2 snRNP-associated SURP motif-containing protein Neighboring gene glutamic acid-rich protein Neighboring gene uncharacterized LOC105286118 Neighboring gene Ras GTPase activating protein 1 Neighboring gene Matrix metalloproteinase 1 Neighboring gene Kinesin heavy chain 73

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_039517.1 Chromosome 12 Reference Obir_v5.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables UDP-xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of Notch signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein O-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    O-glucosyltransferase rumi homolog
    Names
    O-glucosyltransferase rumi-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Obir_v5.4

    Genomic

    1. NC_039517.1 Reference Obir_v5.4

      Range
      187791..189692
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011350807.3 → XP_011349109.1  O-glucosyltransferase rumi homolog isoform X2

      Related
      XP_011349109.1, XM_011350807.3
      Conserved Domains (1) summary
      cl23835
      Location:76 → 275
      Glyco_transf_90; Glycosyl transferase family 90

    2. XM_011350806.3 → XP_011349108.1  O-glucosyltransferase rumi homolog isoform X1

      See identical proteins and their annotated locations for XP_011349108.1

      UniProtKB/TrEMBL
      A0A026VVQ5
      Related
      XP_011349108.1, XM_011350806.3
      Conserved Domains (1) summary
      cl23835
      Location:76 → 403
      Glyco_transf_90; Glycosyl transferase family 90
    Nucleotide Protein
    Heading Accession and Version

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    Other Literature Sources
    Molecular Biology Databases