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    pgaB poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB [ Yersinia rochesterensis ]

    Gene ID: 82550935, updated on 27-Apr-2024

    Summary

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    Gene symbol
    pgaB
    Gene description
    poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
    Locus tag
    DXZ79_RS09155
    Gene type
    protein coding
    Organism
    Yersinia rochesterensis (strain: ATCC BAA-2637, nat-host: Homo sapiens, culture-collection: ATCC:BAA-2637, type-material: type strain of Yersinia kristensenii subsp. rochesterensis)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
    Old locus tag
    DXZ79_09135
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    Genomic context

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    NZ_CP032482.1Genomic Context describing neighboring genes Neighboring gene M24 family metallopeptidase Neighboring gene poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA Neighboring gene poly-beta-1,6-N-acetyl-D-glucosamine synthase Neighboring gene GNAT family protein Neighboring gene poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP032482.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole-Genome Yersinia sp. Assemblies from 10 Diverse Strains. Daligault HE, et al. Genome Announc, 2014 Oct 23. PMID 25342679, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB
    WP_038633552.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP032482.1 Reference assembly

      Range
      1945119..1947143
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_038633552.1 MULTISPECIES: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB [Yersinia]

      See identical proteins and their annotated locations for WP_038633552.1

      UniProtKB/TrEMBL
      A0A386HDS9
      Conserved Domains (1) summary
      PRK14581
      Location:1 → 673
      hmsF; outer membrane N-deacetylase; Provisional
    Nucleotide Protein
    Heading Accession and Version