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    SLC25A20 solute carrier family 25 member 20 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100477498, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SLC25A20
    Gene description
    solute carrier family 25 member 20
    Locus tag
    PANDA_015673
    See related
    Ensembl:ENSAMEG00000000469
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    human mouse all
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    Genomic context

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    See SLC25A20 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (17576313..17608850, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218323.1 (9084..36915)

    Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene inositol hexakisphosphate kinase 2 Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene prolyl 4-hydroxylase, transmembrane

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyl carnitine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables low-density lipoprotein particle binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carnitine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial carnitine/acylcarnitine carrier protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048221.1 Reference ASM200744v2 Primary Assembly

      Range
      17576313..17608850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034658282.1 → XP_034514173.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

      UniProtKB/TrEMBL
      D2HTX4, G1L0V2
      Related
      ENSAMEP00000000504.1, ENSAMET00000000523.2

    2. XM_011233353.3 → XP_011231655.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

      UniProtKB/TrEMBL
      D2HTX4, G1L0V2
      Related
      ENSAMEP00000034743.1, ENSAMET00000038129.1
      Conserved Domains (2) summary
      PTZ00169
      Location:11 → 277
      PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
      pfam00153
      Location:106 → 198
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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