U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC105133355 uncharacterized LOC105133355 [ Populus euphratica (Euphrates poplar) ]

    Gene ID: 105133355, updated on 1-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC105133355
    Gene description
    uncharacterized LOC105133355
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus euphratica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC105133355 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current PopEup_1.0 (GCF_000495115.1) Unplaced Scaffold NW_011499905.1 (1092968..1095479)

    NW_011499905.1Genomic Context describing neighboring genes Neighboring gene outer envelope protein 64, chloroplastic Neighboring gene uncharacterized LOC105133352 Neighboring gene RING-H2 finger protein ATL70-like Neighboring gene uncharacterized transmembrane protein DDB_G0289901-like Neighboring gene double-stranded RNA-binding protein 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_011499905.1 Unplaced Scaffold Reference PopEup_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein histidyl modification to diphthamide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC105133355

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Populus euphratica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PopEup_1.0 Primary Assembly

    Genomic

    1. NW_011499905.1 Reference PopEup_1.0 Primary Assembly

      Range
      1092968..1095479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011037314.1 → XP_011035616.1  uncharacterized protein LOC105133355 isoform X2

      UniProtKB/TrEMBL
      A0AAJ6UUG5

    2. XM_011037313.1 → XP_011035615.1  uncharacterized protein LOC105133355 isoform X1

      UniProtKB/TrEMBL
      A0AAJ6UVB5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases