U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Larimichthys crocea (large yellow croaker) ]

    Gene ID: 104918319, updated on 12-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    tab2
    Gene description
    TGF-beta activated kinase 1 (MAP3K7) binding protein 2
    Locus tag
    EH28_22076
    See related
    Ensembl:ENSLCRG00005003452
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Larimichthys crocea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Sciaenidae; Larimichthys
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See tab2 in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current L_crocea_2.0 (GCF_000972845.2) XI NC_040021.1 (18314151..18351350, complement)
    101 previous assembly L_crocea_1.0 (GCF_000972845.1) Unplaced Scaffold NW_017609727.1 (1966502..2003243)

    Chromosome XI - NC_040021.1Genomic Context describing neighboring genes Neighboring gene glycoprotein integral membrane 1 Neighboring gene peptidylprolyl isomerase (cyclophilin)-like 4 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene cyclin-dependent kinase 19 Neighboring gene adenosylmethionine decarboxylase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Larimichthys crocea Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference L_crocea_2.0 Primary Assembly

    Genomic

    1. NC_040021.1 Reference L_crocea_2.0 Primary Assembly

      Range
      18314151..18351350 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027284181.1 → XP_027139982.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X5

    2. XM_019253325.2 → XP_019108870.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    3. XM_019253324.2 → XP_019108869.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

      Related
      ENSLCRP00005006902.1, ENSLCRT00005007141.1

    4. XM_010730034.3 → XP_010728336.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

      UniProtKB/TrEMBL
      A0A6G0I6X3
      Conserved Domains (4) summary
      smart00547
      Location:725 → 748
      ZnF_RBZ; Zinc finger domain
      cd14362
      Location:9 → 50
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:726 → 745
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam09770
      Location:225 → 302
      PAT1; Topoisomerase II-associated protein PAT1

    5. XM_010730033.3 → XP_010728335.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

      See identical proteins and their annotated locations for XP_010728335.1

      UniProtKB/TrEMBL
      A0A4P8PAH5
      Related
      ENSLCRP00005006901.1, ENSLCRT00005007140.1
      Conserved Domains (3) summary
      smart00547
      Location:730 → 753
      ZnF_RBZ; Zinc finger domain
      cd14362
      Location:9 → 50
      CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
      sd00029
      Location:731 → 750
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.