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    SNX4 sorting nexin 4 [ Meleagris gallopavo (turkey) ]

    Gene ID: 100547839, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SNX4
    Gene description
    sorting nexin 4
    See related
    Ensembl:ENSMGAG00000012168
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meleagris gallopavo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
    Orthologs
    human mouse all
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    Genomic context

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    See SNX4 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Turkey_5.1 (GCF_000146605.3) 7 NC_015017.2 (24399696..24429701, complement)
    Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 7 NC_015017.1 (29550998..29579261, complement)

    Chromosome 7 - NC_015017.2Genomic Context describing neighboring genes Neighboring gene leishmanolysin like peptidase Neighboring gene TGF-beta receptor type-2-like Neighboring gene oxysterol binding protein like 11 Neighboring gene zinc finger protein 148 Neighboring gene solute carrier family 12 member 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Turkey_5.1 Primary Assembly

    Genomic

    1. NC_015017.2 Reference Turkey_5.1 Primary Assembly

      Range
      24399696..24429701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003207684.4 → XP_003207732.2  sorting nexin-4

      UniProtKB/TrEMBL
      G1NHV5
      Related
      ENSMGAP00000025887.1, ENSMGAT00000037038.1
      Conserved Domains (2) summary
      cd06864
      Location:9 → 136
      PX_SNX4; The phosphoinositide binding Phox Homology domain of Sorting Nexin 4
      cd07622
      Location:157 → 400
      BAR_SNX4; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 4
    Nucleotide Protein
    Heading Accession and Version

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