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    LOC100249652 ethylene-responsive transcription factor ERF038 [ Vitis vinifera (wine grape) ]

    Gene ID: 100249652, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100249652
    Gene description
    ethylene-responsive transcription factor ERF038
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    Also known as
    GO:0003700 GO:0005634 GO:0006355
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    Genomic context

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    See LOC100249652 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 14 NC_081818.1 (19609716..19610957)
    102 previous assembly 12X (GCF_000003745.3) 14 NC_012020.3 (19671395..19672638)

    Chromosome 14 - NC_081818.1Genomic Context describing neighboring genes Neighboring gene protein DETOXIFICATION 12-like Neighboring gene cyclin-dependent kinase D-1 Neighboring gene uncharacterized LOC109123884 Neighboring gene uncharacterized LOC109123855

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylene-responsive transcription factor ERF038

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081818.1 Reference ASM3070453v1 Primary Assembly

      Range
      19609716..19610957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010662082.3 → XP_010660384.1  ethylene-responsive transcription factor ERF038

      UniProtKB/TrEMBL
      A0A438DEZ9, F6HSN8
      Conserved Domains (1) summary
      smart00380
      Location:73 → 131
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

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