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    LOC104879158 RING-H2 finger protein ATL14-like [ Vitis vinifera (wine grape) ]

    Gene ID: 104879158, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC104879158
    Gene description
    RING-H2 finger protein ATL14-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC104879158 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 4 NC_081808.1 (19596885..19597319)
    102 previous assembly 12X (GCF_000003745.3) 4 NC_012010.3 (18135229..18135663)

    Chromosome 4 - NC_081808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109122500 Neighboring gene sulfite exporter TauE/SafE family protein 3 Neighboring gene ATP-dependent DNA helicase DDM1 Neighboring gene uncharacterized LOC100249598

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING-H2 finger protein ATL14-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081808.1 Reference ASM3070453v1 Primary Assembly

      Range
      19596885..19597319
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010650992.1 → XP_010649294.1  RING-H2 finger protein ATL14-like

      Conserved Domains (1) summary
      pfam13639
      Location:90 → 132
      zf-RING_2; Ring finger domain
    Nucleotide Protein
    Heading Accession and Version

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