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    LOC100241097 WAT1-related protein At1g43650 [ Vitis vinifera (wine grape) ]

    Gene ID: 100241097, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100241097
    Gene description
    WAT1-related protein At1g43650
    Locus tag
    VIT_00019713001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100241097 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 2 NC_081806.1 (2464608..2466532, complement)
    102 previous assembly 12X (GCF_000003745.3) 2 NC_012008.3 (2652630..2654588, complement)

    Chromosome 2 - NC_081806.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132254878 Neighboring gene probable cinnamyl alcohol dehydrogenase 1 Neighboring gene WAT1-related protein At5g64700 Neighboring gene WAT1-related protein At1g43650

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WAT1-related protein At1g43650

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081806.1 Reference ASM3070453v1 Primary Assembly

      Range
      2464608..2466532 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002271290.5 → XP_002271326.3  WAT1-related protein At1g43650

      See identical proteins and their annotated locations for XP_002271326.3

      UniProtKB/TrEMBL
      F6HUA3
      Conserved Domains (2) summary
      PLN00411
      Location:9 → 340
      PLN00411; nodulin MtN21 family protein; Provisional
      pfam00892
      Location:184 → 324
      EamA; EamA-like transporter family
    Nucleotide Protein
    Heading Accession and Version

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